News

The first practical training course on nanopore barcoding and genome analysis wrapped up

14 July 2025

The Practical Training Course on Nanopore Barcoding and Genome Analysis, held from July 7–9, 2025, at the Institute of Plant Physiology and Genetics (IPPG-BAS) in Sofia, has successfully wrapped up. Organised by the Bulgarian Barcode of Life (BgBOL) Consortium and supported by the Biodiversity Genomics Europe (BGE) project, the course marked a first-of-its-kind training event in Bulgaria focused on portable sequencing technologies and their use in biodiversity research.

 

Over three days, students and early-career researchers got hands-on experience with key steps in the DNA barcoding workflow, including PCR, library preparation, and real-time sequencing using the Oxford Nanopore MinION platform. The program emphasised practical skills and direct engagement, with all participants working through the lab steps themselves.

The course brought together a diverse team of instructors from Europe - Alexandros Triantafyllidis, Spiros Papakostas, Konstantinos Gkagkavouzis, and Elisavet Kaitetzidou from the Aristotle University of Thessaloniki (Greece); Tomasz Mamos from the University of Lodz (Poland); and Alexandra Tokareva from the National Museum of Natural History (BAS, Bulgaria). Their combined expertise made for a smooth and engaging learning experience.

One of the highlights was a live demonstration of DNA extraction and sequencing in real time, which helped demystify the technology and sparked lots of discussion among participants. The course also served as a great platform for informal networking and building connections between Bulgarian, Greek, and Polish teams working on related projects.

This event could not have happened without the IPPG-BAS team, led by Prof. Valya Vassileva, and their warm welcome and logistical support. Dr. Stefaniya Kamenova (NMNH-BAS), prof. Lyubomir Penev (Pensoft) assoc. prof. Georgi Bonchev (IPPG-BAS) were the drivers for bringing everything together. 

The event is a big step forward for building local capacity in biodiversity genomics and opens new doors for future collaboration across the region.